​The paper “Percolation Package – From Script Sharing to Package Publication” by Sophie C. Schmidt and Simon Maddison (2023) describes the development of an R package designed to apply Percolation Analysis to archaeological spatial data. In an earlier publication, Maddison and Schmidt (2020) describe Percolation Analysis and provide case studies that demonstrate its usefulness at different spatial scales. In the current paper, the authors use their experience collaborating to develop the R package as part of a broader argument for the importance of code sharing to the research process. 

The paper begins by describing the development process of the R package, beginning with borrowing code from a geographer, refining it to fit archaeological case studies, and then collaborating to further refine and systematize the code into an R package that is more easily reusable by other researchers. As the review by Joe Roe noted, a strength of the paper is “presenting the development process as it actually happens rather than in an idealized form.” The authors also include a section about the lessons learned from their experience. 

Moving on from the anecdotal data of their own experience, the authors also explore code sharing practices in archaeology by briefly examining two datasets. One dataset comes from “open-archaeo” (https://open-archaeo.info/), an on-line list of open-source archaeological software maintained by Zack Batist. The other dataset includes articles published between 2018 and 2023 in the Journal of Computer Applications in Archaeology. Schmidt and Maddison find that these two datasets provide contrasting views of code sharing in archaeology: many of the resources in the open-archaeo list are housed on Github, lack persistent object identifiers, and many are not easily findable (other than through the open-archaeo list). Research software attached to the published articles, on the other hand, is more easily findable either as a supplement to the published article, or in a repository with a DOI.

The examination of code sharing in archaeology through these two datasets is preliminary and incomplete, but it does show that further research into archaeologists’ code-writing and code-sharing practices could be useful. Archaeologists often create software tools to facilitate their research, but how often?  How often is research software shared with published articles? How much attention is given to documentation or making the software usable for other researchers? What are best (or good) practices for sharing code to make it findable and usable? Schmidt and Maddison’s paper provides partial answers to these questions, but a more thorough study of code sharing in archaeology would be useful. Differences among journals in how often they publish articles with shared code, or the effects of age, gender, nationality, or context of employment on attitudes toward code sharing seem like obvious factors for a future study to consider.

Shared code that is easy to find and easy to use benefits the researchers who adopt code written by others, but code authors also have much to gain by sharing. Properly shared code becomes a citable research product, and the act of code sharing can lead to productive research collaborations, as Schmidt and Maddison describe from their own experience. The strength of this paper is the attention it brings to current code-sharing practices in archaeology. I hope the paper will also help improve code sharing in archaeology by inspiring more archaeologists to share their research code so other researchers can find and use (and cite) it. 

References

Maddison, M.S. and Schmidt, S.C. (2020). Percolation Analysis – Archaeological Applications at Widely Different Spatial Scales. Journal of Computer Applications in Archaeology, 3(1), p.269–287. https://doi.org/10.5334/jcaa.54 

Schmidt, S. C., and Maddison, M. S. (2023). Percolation Package - From script sharing to package publication, Zenodo, 7966497, ver. 3 peer-reviewed and recommended by Peer Community in Archaeology. https://doi.org/10.5281/zenodo.7966497

The manuscript "ARIADNEplus Visual Media Service 3D configurator: toward full guided publication of high-resolution 3D data​" by Potenziani et al. [1] provides an excellent introduction to the Visual Media Service 3D Configurator.  This is an exciting tool, focused on cultural heritage, that forms part of the Visual Media Service, a web-based platform for uploading a range of complex data sets, including high-resolution images, Reflectance Transformation Imaging images and 3D models and transforming them into an appropriate format for interation and visualisation on the web.  The 3D Configurator Tool provides researchers with a wizard which assist with the presentation of 3D models.

This manuscript provides a history and context for the development of the Visual Media Service and previous related tools such as 3DHOP, Nexus and Relight/OpenLIME.  It also provides detailed information about the functionality of the 3D Configurator, including the Alignment, Material & Light, Navigation, Interface and Annotation steps.  The Discussion section provides information about applications and users of the Visual Media Service, current limitations and planned future developments.

Reviewers Hageneuer, Champion, Trognitz and Panagiotidis all provided important suggestions to the authors which have improved the clarity and scope of this manuscript.  While this manscript does not present a case study using this tool, I recommend it to readers as a detailed and clear introduction to the Visual Media Service 3D configurator which may inspire them to use this for their own research.

References

[1] Potenziani, M., Ponchio, F., Callieri, M., and Cignoni, P. (2024). ARIADNEplus Visual Media Service 3D configurator: toward full guided publication of high-resolution 3D data. Zenodo, 8075050, ver. 5 peer-reviewed and recommended by Peer Community in Archaeology. https://doi.org/10.5281/zenodo.10894515​

This paper [1] presents an innovative approach to address the prevalent challenge of unbalanced datasets in coin type recognition, shifting the focus from coin class type recognition to coin mint recognition. Despite this shift, the issue of unbalanced data persists. To mitigate this, the authors introduce a method to split larger classes into smaller ones, integrating them into an 'additional class layer'.

Three distinct machine learning (ML) methodologies were employed to identify new possible classes, with one approach utilising unsupervised clustering alongside manual intervention, while the others leverage object detection, and Natural Language Processing (NLP) techniques. However, despite these efforts, overfitting remained a persistent issue, prompting the authors to explore alternative methods such as dataset improvement and Generative Adversarial Networks (GANs).

The paper contributes significantly to the intersection of ML techniques and archaeology, particularly in addressing overfitting challenges. Furthermore, the authors' candid acknowledgment of the limitations of their approaches serves as a valuable resource for researchers encountering similar obstacles.

This study stems from the D4N4 project, aimed at developing a machine learning-based coin recognition model for the extensive "Corpus Nummorum" dataset, comprising over 19,600 coin types and 49,000 coins from various ancient landscapes. Despite encountering challenges with overfitting due to the dataset's imbalance, the authors' exploration of multiple methodologies and transparent documentation of their limitations enriches the academic discourse and provides a foundation for future research in this field.

Reference

[1] Gampe, S. and Tolle, K. (2024). Creating an Additional Class Layer with Machine Learning to counter Overfitting in an Unbalanced Ancient Coin Dataset. Zenodo, 8298077, ver. 4 peer-reviewed and recommended by Peer Community in Archaeology. https://doi.org/10.5281/zenodo.8298077

The paper by A. Lien-Talks [1] presents a small project looking at the use of crowd sourced data collection and particpatory GIS. In particular it looks at the potential of these tools in response to socially disruptive and isolating events such as the COVID-19 pandemic as well as the potential role of digitially mediated heritage initiatives in tackling some of the challenges of changing demographics and life styles.

The types of technologies employed are relatively mature, the project identifies potential for such approaches to be used within the local-history/local community settings, though is also a reminer that depsite the much broader adoption of technology within all areas of society than even a few years ago many barriers still remain. While the the sample size and data collected in the project is relatively modest, the focus on empathy toward the intended audiences from the design process, as well as some of the qualitative feedback reported serve as a reminder that participatory, or crowd-sourced data collection initiatives in heritage can, and perhaps should place potential social benefit before data-acquisition of objectives.

The project also presents a demographic that is not often represented within the literature and the publication and as such the publication of the article represents a meaningful contribution to ongoing discussions of the role heritage and digitally mediated community archaeology can play a role in developing our societies.

References

[1] Lien-Talks, A. (2024). The Ashwell Project: Creating an Online Geospatial Community. Zenodo, 8307882, ver. 4 peer-reviewed and recommended by Peer Community in Archaeology. https://doi.org/10.5281/zenodo.8307882

“What is a form? On the classification of archaeological pottery” by P. Boissinot (1) is a timely contribution to broader theoretical reflections on classification and ordering practices in archaeology, including type-construction and justification. Boissinot rightly reminds us that engagement with the type concept always touches upon the uneasy relationship between the abstract and the concrete, alternatively cast as the ongoing struggle in knowledge production between idealization and particularization. Types are always abstract and as such both ‘more’ and ‘less’ than the concrete objects they refer to. They are ‘more’ because they establish a higher-order identity of variously heterogeneous, concrete objects and they are ‘less’ because they necessarily reduce the richness of the concrete and often erase it altogether. The confusion that types evoke in archaeology and elsewhere has therefore a lot to do with the fact that types are simply not spatiotemporally distinct particulars. As abstract entities, types so almost automatically re-introduce the question of universalism but they do not decide this question, and Boissinot also tentatively rejects such ambitions. In fact, with Boissinot (1) it may be said that universality is often precisely confused with idealization, which is indispensable to all archaeological ordering practices. 

Idealization, increasingly recognized as an important epistemic operation in science (2, 3), paradoxically revolves around the deliberate misrepresentation of the empirical systems being studied, with models being the paradigm cases (4). Models can go so far as to assume something strictly false about the phenomena under consideration in order to advance their epistemic goals. In the words of Angela Potochnik (5), ‘the role of idealization in securing understanding distances understanding from truth but […] this understanding nonetheless gives rise to scientific knowledge’. The affinity especially to models may in part explain why types are so controversial and are often outright rejected as ‘real’ or ‘useful’ by those who only recognize the existence of concrete particulars (nominalism). As confederates of the abstract, types thus join the ranks of mathematics and geometry, which the author identifies as prototypical abstract systems. Definitions are also abstract. According to Boissinot (1), they delineate a ‘position of limits’, and the precision and rigorousness they bring comes at the cost of subjectivity. This unites definitions and types, as both can be precise and clear-cut but they can never be strictly singular or without alternative – in order to do so, they must rely on yet another higher-order system of external standards, and so ad infinitum. 

Boissinot (1) advocates a mathematical and thus by definition abstract approach to archaeological type-thinking in the realm of pottery, as the abstractness of this approach affords relatively rigorous description based on the rules of geometry. Importantly, this choice is not a mysterious a priori rooted in questionable ideas about the supposed superiority of such an approach but rather is the consequence of a careful theoretical exploration of the particularities (domain-specificities) of pottery as a category of human practice and materiality. The abstract thus meets the concrete again: objects of pottery, in sharp contrast to stone artefacts for example, are the product of additive processes. These processes, moreover, depend on the ‘fusion’ of plastic materials and the subsequent fixation of the resulting configuration through firing (processes which, strictly speaking, remove material, such as stretching, appear to be secondary vis-à-vis global shape properties). Because of this overriding ‘fusion’ of pottery, the identification of parts, functional or otherwise, is always problematic and indeterminate to some extent. As products of fusion, parts and wholes represent an integrated unity, and this distinguishes pottery from other technologies, especially machines. The consequence is that the presence or absence of parts and their measurements may not be a privileged locus of type-construction as they are in some biological contexts for example. The identity of pottery objects is then generally bound to their fusion. As a ‘plastic montage’ rather than an assembly of parts, individual parts cannot simply be replaced without threatening the identity of the whole. Although pottery can and must sometimes be repaired, this renders its objects broadly morpho-static (‘restricted plasticity’) rather than morpho-dynamic, which is a condition proper to other material objects such as lithic (use and reworking) and metal artefacts (deformation) but plays out in different ways there. This has a number of important implications, namely that general shape and form properties may be expected to hold much more relevant information than in technological contexts characterized by basal modularity or morpho-dynamics.

It is no coincidence that ‘fusion’ is also emphasized by Stephen C. Pepper (6) as a key category of what he calls contextualism. Fusion for Pepper pays dividends to the interpenetration of different parts and relations, and points to a quality of wholes which cannot be reduced any further and integrates the details into a ‘more’. Pepper maintains that ‘fusion, in other words, is an agency of simplification and organization’ – it is the ‘ultimate cosmic determinator of a unit’ (p. 243-244, emphasis added). This provides metaphysical reasons to look at pottery from a whole-centric perspective and to foreground the agency of its materiality. This is precisely what Boissinot (1) does when he, inspired by the great techno-anthropologist François Sigaut (7), gestures towards the fact that elementarily a pot is ‘useful for containing’. He thereby draws attention not to the function of pottery objects but to what pottery as material objects do by means of their material agency: they disclose a purposive tension between content and container, the carrier and carried as well as inclusion and exclusion, which can also be understood as material ‘forces’ exerted upon whatever is to be contained. This, and not an emic reading of past pottery use, leads to basic qualitative distinctions between open and closed vessels following Anna O. Shepard’s (8) three basic pottery categories: unrestricted, restricted, and necked openings. These distinctions are not merely intuitive but attest to the object-specificity of pottery as fused matter. 

This fused dimension of pottery also leads to a recognition that shapes have geometric properties that emerge from the forced fusion of the plastic material worked, and Boissinot (1) suggests that curvature is the most prominent of such features, which can therefore be used to describe ‘pure’ pottery forms and compare abstract within-pottery differences. A careful mathematical theorization of curvature in the context of pottery technology, following George D. Birkhoff (9), in this way allows to formally distinguish four types of ‘geometric curves’ whose configuration may serve as a basis for archaeological object grouping. The idealization involved in this proposal is not accidental but deliberately instrumental – it reminds us that type-thinking in archaeology cannot escape the abstract. It is notable here that the author does not suggest to simply subject total pottery form to some sort of geometric-morphometric analysis but develops a proposal that foregrounds a limited range of whole-based geometric properties (in contrast to part-based) anchored in general considerations as to the material specificity of pottery as quasi-species of objects.

As Boissinot (1) notes himself, this amounts to a ‘naturalization’ of archaeological artefacts and offers somewhat of an alternative (a third way) to the old discussion between disinterested form analysis and functional (and thus often theory-dependent) artefact groupings. He thereby effectively rejects both of these classic positions because the first ignores the particularities of pottery and the real function of artefacts is in most cases archaeologically inaccessible. In this way, some clear distance is established to both ethnoarchaeology and thing studies as a project. Attending to the ‘discipline of things’ proposal by Bjørnar Olsen and others (10, 11), and by drawing on his earlier work (12), Boissinot interestingly notes that archaeology – never dealing with ‘complete societies’ – could only be ‘deficient’. This has mainly to do with the underdetermination of object function by the archaeological record (and the confusion between function and functionality) as outlined by the author. It seems crucial in this context that Boissinot does not simply query ‘What is a thing?’ as other thing-theorists have previously done, but emphatically turns this question into ‘In what way is it not the same as something else?’. He here of course comes close to Olsen’s In Defense of Things insofar as the ‘mode of being’ or the ‘ontology’ of things is centred. What appears different, however, is the emphasis on plurality and within-thing heterogeneity on the level of abstract wholes. With Boissinot, we always have to speak of ontologies and modes of being and those are linked to different kinds of things and their material specificities. Theorizing and idealizing these specificities are considered central tasks and goals of archaeological classification and typology. As such, this position provides an interesting alternative to computational big-data (the-more-the-better) approaches to form and functionally grounded type-thinking, yet it clearly takes side in the debate between empirical and theoretical type-construction as essential object-specific properties in the sense of Boissinot (1) cannot be deduced in a purely data-driven fashion.

Boissinot’s proposal to re-think archaeological types from the perspective of different species of archaeological objects and their abstract material specificities is thought-provoking and we cannot stop wondering what fruits such interrogations would bear in relation to other kinds of objects such as lithics, metal artefacts, glass, and so forth. In addition, such meta-groupings are inherently problematic themselves, and they thus re-introduce old challenges as to how to separate the relevant super-wholes, technological genesis being an often-invoked candidate discriminator. The latter may suggest that we cannot but ultimately circle back on the human context of archaeological objects, even if we, for both theoretical and epistemological reasons, wish to embark on strictly object-oriented archaeologies in order to emancipate ourselves from the ‘contamination’ of language and in-built assumptions.

Bibliography

1. Boissinot, P. (2024). What is a form? On the classification of archaeological pottery, Zenodo, 7429330, ver. 4 peer-reviewed and recommended by Peer Community in Archaeology. https://doi.org/10.5281/zenodo.10718433

2. Fletcher, S.C., Palacios, P., Ruetsche, L., Shech, E. (2019). Infinite idealizations in science: an introduction. Synthese 196, 1657–1669. https://doi.org/10.1007/s11229-018-02069-6

3. Potochnik, A. (2017). Idealization and the aims of science (University of Chicago Press). https://doi.org/10.7208/chicago/9780226507194.001.0001

4. J. Winkelmann, J. (2023). On Idealizations and Models in Science Education. Sci & Educ 32, 277–295. https://doi.org/10.1007/s11191-021-00291-2

5. Potochnik, A. (2020). Idealization and Many Aims. Philosophy of Science 87, 933–943. https://doi.org/10.1086/710622

6. Pepper S. C. (1972). World hypotheses: a study in evidence, 7. print (University of California Press).

7. Sigaut, F. (1991). “Un couteau ne sert pas à couper, mais en coupant. Structure, fonctionnement et fonction dans l’analyse des objets” in 25 Ans d’études Technologiques En Préhistoire. Bilan et Perspectives (Association pour la promotion et la diffusion des connaissances archéologiques), pp. 21–34.

8. Shepard, A. O. (1956). Ceramics for the Archeologist (Carnegie Institution of Washington n° 609).

9. Birkhoff G. D. (1933). Aesthetic Measure (Harvard University Press).

10. Olsen, B. (2010). In defense of things: archaeology and the ontology of objects (AltaMira Press). https://doi.org/10.1093/jdh/ept014

11. Olsen, B., Shanks, M., Webmoor, T., Witmore, C. (2012). Archaeology: the discipline of things (University of California Press). https://doi.org/10.1525/9780520954007

12. Boissinot, P. (2011). “Comment sommes-nous déficients ?” in L’archéologie Comme Discipline ? (Le Seuil), pp. 265–308.